Report for Toulligqc-report-2025-04-03-155812Run statistics ⓘ
| Measure | Value |
|---|---|
| Report name | Toulligqc-report-2025-04-03-155812 |
| Experiment group | Unknown |
| Sample ID | Unknown |
| Run ID | Unknown |
| Run date | Unknown |
| Run duration | 0h08m19s |
| Flowcell ID | Unknown |
| Flowcell product code | Unknown |
| Flowcell version | Unknown |
| Kit | Unknown |
| Sequencing kit | Unknown |
| Barcode kits | Unknown |
| Selected speed (bps) | Unknown |
| Sample frequency (Hz) | Unknown |
| Yield | 1.80G |
| Read count | 545,861 |
| N50 (bp) | 3,829 |
| L50 | 387,825 |
Device and software ⓘ
| Measure | Value |
|---|---|
| Device type | Unknown |
| Device ID | Unknown |
| Device hostname | Unknown |
| Device OS | Unknown |
| Distribution version | Unknown |
| MinKNOW version | Unknown |
| Basecaller name | ccs |
| Basecaller version | 8.3.0 (commit 8.3.0) |
| Basecaller analysis | Unknown |
| Basecalling date | Unknown |
| Model file | Unknown |
| Min qscore threshold | 9.00 |
| ToulligQC version | 2.7.1 |
| All reads | Pass reads | Fail reads | |
|---|---|---|---|
| count | 545,861 | 545,861 | 0 |
| percent | 100.00 | 100.00 | 0.00 |
| All reads | Pass reads | Fail reads | |
|---|---|---|---|
| count | 545,861 | 545,861 | 0 |
| mean | 3,302.82 | 3,302.82 | 0 |
| std | 2,144.71 | 2,144.71 | 0 |
| min | 132.00 | 132.00 | 0 |
| 25% | 1,996.00 | 1,996.00 | 0 |
| median | 2,817.00 | 2,817.00 | 0 |
| 75% | 4,129.00 | 4,129.00 | 0 |
| max | 52,190.00 | 52,190.00 | 0 |
| All reads | Pass reads | Fail reads | |
|---|---|---|---|
| count | 545,861 | 545,861 | 0 |
| mean | 35.21 | 35.21 | 0 |
| std | 6.52 | 6.52 | 0 |
| min | 13.37 | 13.37 | 0 |
| 25% | 31.72 | 31.72 | 0 |
| median | 39.13 | 39.13 | 0 |
| 75% | 40.00 | 40.00 | 0 |
| max | 40.00 | 40.00 | 0 |